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Söding lab
August 9th 2018:
We updated the server to version 1.4.0. (
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Results for: example run
Query motifs
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#
IUPAC
PWM
reverse Comp.
Download
1
SSGATGASTCA
2
TGAYGTCA
3
CGSSSSCG
Motif # 1
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Best matches with our motif database
name
e-value
query motif
database PWM
reverse Comp.
DB entry
JunD
5.3E-03
Fra-1
5.9E-03
Fra-2
5.9E-03
SMARCC1
8.7E-03
JunB
9.2E-03
Motif # 2
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Best matches with our motif database
name
e-value
query motif
database PWM
reverse Comp.
DB entry
CREB-3L2
3.3E-02
ATF-4
1.6E-01
NF-IL3
2.5E-01
Hox-B6
3.0E-01
Motif # 3
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Best matches with our motif database
name
e-value
query motif
database PWM
reverse Comp.
DB entry
Tool settings
Job id:
00000000-0000-0000-0000-000000000003
Motif File Format:
MEME
Motif File:
example.meme
MMcompare database:
GTRD_v1804_HUMAN
MMcompare e-value cutoff:
0.50